The detailed information of tRNA gene sequence


Sequence ID>WENV170684059
Genome IDLFRM01016957
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2435
End posion on genome 2360
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
accatttctt
tRNA gene sequence 
GGTCGCTTAGCTCAGTTGGTAGAGCGCCACCCTTACAAGGTGGATGTCATAAGTTCGAGT
CTTATAGCGACCACCA
Downstream region at tRNA end position 
cttttttttg
Secondary structure (Cloverleaf model)
>WENV170684059	Val	TAC
                   t      ACCA cttttttttg
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     C - G
                     T - A          T G
                    T     T A T T C     A
      T G A        A      | | | | |     G
    T       C T C G       A T A A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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