The detailed information of tRNA gene sequence


Sequence ID>WENV170684198
Genome IDLFRM01025928
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 22629
End posion on genome 22704
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
aacttcatac
tRNA gene sequence 
GCCCTCATAGCTCAGTAGGCAGAGCGCATCCATGGTAAGGATGAGGTCACCAGTTCGACC
CTGGTTGAGGGCTCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170684198	Thr	GGT
                   c      TCCA nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T          C C
                    T     T G G T C     A
      T G A        A      | | | | |     G
    A       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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