The detailed information of tRNA gene sequence


Sequence ID>WENV170684241
Genome IDLFRM01028400
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1565
End posion on genome 1490
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tgaaaaaact
tRNA gene sequence 
GGCCCGTTGGAGAAACGGTTAACTCACATGCCTTTCACGCATGCATTCACGGGTTCGAAT
CCCGTACGGGTCACCA
Downstream region at tRNA end position 
atagaaaatt
Secondary structure (Cloverleaf model)
>WENV170684241	Glu	TTC
                   t      ACCA atagaaaatt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      C A A        G      | | | | |     G
    G       A G A G       A C G G G     C
    G         | | |                 T T
    T       A C T C
      T A          A     CATTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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