The detailed information of tRNA gene sequence


Sequence ID>WENV170684249
Genome IDLFRM01028761
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 24173
End posion on genome 24248
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gtcaccaaac
tRNA gene sequence 
GGGCGCTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGGGGGTCATAGGTTCGAGC
CCTATAGTGCCCACCA
Downstream region at tRNA end position 
cagcagttgt
Secondary structure (Cloverleaf model)
>WENV170684249	Val	TAC
                   c      ACCA cagcagttgt
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     T - A          C G
                    T     T A T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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