The detailed information of tRNA gene sequence


Sequence ID>WENV170684269
Genome IDLFRM01029960
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 696
End posion on genome 771
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
caaaggatgt
tRNA gene sequence 
GGGACGTTAGCTCAGCTGGTAGAGCAGCGGACTTTTAATCCGTTGGTCACTGGTTCGAAT
CCAGTACGTCCTACCA
Downstream region at tRNA end position 
agccacacaa
Secondary structure (Cloverleaf model)
>WENV170684269	Lys	TTT
                   t      ACCA agccacacaa
                     G + T
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     T - A          T A
                    T     T G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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