The detailed information of tRNA gene sequence


Sequence ID>WENV170684299
Genome IDLFRM01031637
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 349
End posion on genome 279
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ttaaaaagat
tRNA gene sequence 
GCGGGTGTAGTTTAGTGGTAAAACTTCAGCCTTCCAAGCTGCTGTCGCGAGTTCGATTCT
CGTCACCCGCTttt
Downstream region at tRNA end position 
taatttaaac
Secondary structure (Cloverleaf model)
>WENV170684299	Gly	TCC
                   t      Tttt taatttaaac
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T G C T C     A
        G A        A      + | | | |     G
      T     T T T G       G C G A G     C
      G     | | | |                 T T
      G     A A A C
        T A        T     TGTC
                    T   C
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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