The detailed information of tRNA gene sequence


Sequence ID>WENV170684302
Genome IDLFRM01031730
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5268
End posion on genome 5343
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ccaatgagtt
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCCACGGTTCGATC
CCGTGTAGCTCCACCA
Downstream region at tRNA end position 
attcaaacta
Secondary structure (Cloverleaf model)
>WENV170684302	Ala	GGC
                   t      ACCA attcaaacta
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     G T G C C     A
      C G A        A      | | | | |     G
    T       C T C G       C A C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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