The detailed information of tRNA gene sequence


Sequence ID>WENV170684305
Genome IDLFRM01031787
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 29304
End posion on genome 29378
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
accacaatat
tRNA gene sequence 
GGCCCCTTGGTCAAGTGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATC
CCCTAGGGGTCACCA
Downstream region at tRNA end position 
cgcggcccgg
Secondary structure (Cloverleaf model)
>WENV170684305	Glu	TTC
                   t      ACCA cgcggcccgg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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