The detailed information of tRNA gene sequence


Sequence ID>WENV170684320
Genome IDLFRM01032174
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 6004
End posion on genome 5929
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
acaacaacaa
tRNA gene sequence 
GCCGCTTTAGCTCAGTTGGTAGAGCAGTTCATTCGTAATGAAAAGGTCGCCAGTTCGATT
CCGGCAAGCGGCACCA
Downstream region at tRNA end position 
ataaaaacaa
Secondary structure (Cloverleaf model)
>WENV170684320	Thr	CGT
                   a      ACCA ataaaaacaa
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T T
                    T     C G G C C     A
      T G A        A      | | |   |     G
    T       C T C G       G C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    T - A
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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