The detailed information of tRNA gene sequence


Sequence ID>WENV170684324
Genome IDLFRM01032414
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1419
End posion on genome 1494
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aacagatgat
tRNA gene sequence 
GCCCCCATCGTCTAGCGGTCTAGGACTACGCCCTCTCACGGCGCCAACACCGGTTCAAAT
CCGGTTGGGGGTACGA
Downstream region at tRNA end position 
gttcaccatc
Secondary structure (Cloverleaf model)
>WENV170684324	Glu	CTC
                   t      ACGA gttcaccatc
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G G C C     A
      C G A        C      | | | | |     A
    G       T C T G       A C C G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        T     CAAC
                    A   C
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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