The detailed information of tRNA gene sequence


Sequence ID>WENV170684325
Genome IDLFRM01032414
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1527
End posion on genome 1601
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
catgccaaat
tRNA gene sequence 
TGGGATGTGGTGTAATTGGCAACACAGCTGATTCTGGTTCAGCCATTCTTGGTTCGAGTC
CAGGCATCCCAGCCA
Downstream region at tRNA end position 
acgagccctc
Secondary structure (Cloverleaf model)
>WENV170684325	Gln	CTG
                   t      GCCA acgagccctc
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     G G A C C     A
      T A A        G      | + | | |     G
    T       T G T G       C T T G G     C
    G       | | | |                 T T
    G       A C A C
      C A          A     CATT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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