The detailed information of tRNA gene sequence


Sequence ID>WENV170684344
Genome IDLFRM01033477
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 113
End posion on genome 188
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aggcacaagT
tRNA gene sequence 
GTGTCTGTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTGGGTCGGGGGTTCGAA
TCCCTTCAGGCACGTtc
Downstream region at tRNA end position 
gaccggcagg
Secondary structure (Cloverleaf model)
>WENV170684344	Arg	TCT
                   T      GTtc gaccggcagg
                     G - C
                     T - A
                     G - C
                     T + G
                     C - G
                     T - A
                     G - C          T A
                    T     T T C C C     A
      C G A        A      + + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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