The detailed information of tRNA gene sequence


Sequence ID>WENV170684370
Genome IDLFRM01034955
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1199
End posion on genome 1275
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccattttagt
tRNA gene sequence 
GGCCCGGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
TCCCTTCCGGGTCGCCA
Downstream region at tRNA end position 
tttcccgttt
Secondary structure (Cloverleaf model)
>WENV170684370	Asp	GTC
                   t      GCCA tttcccgttt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK