The detailed information of tRNA gene sequence


Sequence ID>WENV170684399
Genome IDLFRM01036195
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 878
End posion on genome 806
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gcccgaacag
tRNA gene sequence 
GGCCCATTCGTCTATCGGTTAGGACGCAAGATTTTCATTCTTGAAAGAGGGGTTCGACTC
CCCTATGGGCTACat
Downstream region at tRNA end position 
aatatatata
Secondary structure (Cloverleaf model)
>WENV170684399	Glu	TTC
                   g      ACat aatatatata
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T C
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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