The detailed information of tRNA gene sequence


Sequence ID>WENV170684433
Genome IDLFRM01038856
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 438
End posion on genome 513
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aatatataat
tRNA gene sequence 
GGTCCGGTAGTGTAGCGGTTAACATGCCTGCCTGTCACGCAGGAGATCGCGGGTTCGATT
CCCGTCCGGACCGCCA
Downstream region at tRNA end position 
ttataaaatt
Secondary structure (Cloverleaf model)
>WENV170684433	Asp	GTC
                   t      GCCA ttataaaatt
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T T
                    T     T G C C C     A
      C G A        A      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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