The detailed information of tRNA gene sequence


Sequence ID>WENV170684439
Genome IDLFRM01039248
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 303
End posion on genome 379
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
cctgtgacgt
tRNA gene sequence 
GGGCCATTAGCTCAGCTGGCTAGAGCACCTGACTCTTAATCAGGGTGTCCGGGGTTCGAG
TCCCTGATGGCCCACCA
Downstream region at tRNA end position 
tttttttatc
Secondary structure (Cloverleaf model)
>WENV170684439	Lys	CTT
                   t      ACCA tttttttatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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