The detailed information of tRNA gene sequence


Sequence ID>WENV170684470
Genome IDLFRM01041026
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 519
End posion on genome 444
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
agttcaatac
tRNA gene sequence 
GCTCACGTAGCTCAGTCGGTAGAGCACCTCCTTGGTAAGGAGGAGGTCGATGGTTCGATT
CCATTCGTGAGCACCA
Downstream region at tRNA end position 
catacaggca
Secondary structure (Cloverleaf model)
>WENV170684470	Thr	GGT
                   c      ACCA catacaggca
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     C - G
                     G - C          T T
                    T     T T A C C     A
      T G A        A      + | | | |     G
    C       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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