The detailed information of tRNA gene sequence


Sequence ID>WENV170684500
Genome IDLFRM01043215
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 278
End posion on genome 354
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgatccaaaa
tRNA gene sequence 
GGGTCTGTAGCTCAGTTGGTTAGAGCACCGTGTTGATAACGCGGGGGTCGTTGGTTCGAG
ACCAACCAGACCCACCA
Downstream region at tRNA end position 
tgaataccga
Secondary structure (Cloverleaf model)
>WENV170684500	Ile	GAT
                   a      ACCA tgaataccga
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          A G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    G - C
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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