The detailed information of tRNA gene sequence


Sequence ID>WENV170684530
Genome IDLFRM01044320
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2833
End posion on genome 2758
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gtatttaaac
tRNA gene sequence 
GGGGATATAGCTCAGTTGGGAGAGCACCTGCCTTGCAAGCAGGGGGTCAGGAGTTCGAAT
CTCCTTATCTCCACCA
Downstream region at tRNA end position 
aatagaggtt
Secondary structure (Cloverleaf model)
>WENV170684530	Ala	TGC
                   c      ACCA aatagaggtt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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