The detailed information of tRNA gene sequence


Sequence ID>WENV170684556
Genome IDLFRM01045695
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 14948
End posion on genome 15038
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgttcccgtt
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCCGAAGGCGCTCCCCTGCTAAGGGAGTACACCTCAAAAGGGT
GTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tttacgttgt
Secondary structure (Cloverleaf model)
>WENV170684556	Ser	GCT
                   t      GCCA tttacgttgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TACACCTCAAAAGGGTGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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