The detailed information of tRNA gene sequence


Sequence ID>WENV170684608
Genome IDLFRM01048744
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3641
End posion on genome 3566
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gaccaaaatc
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGGAGAGCACCTGCCTTGCAAGCAGGGGGTCAGCGGTTCGAGT
CCGCTCATCTCCACCA
Downstream region at tRNA end position 
gggaaagata
Secondary structure (Cloverleaf model)
>WENV170684608	Ala	TGC
                   c      ACCA gggaaagata
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          T G
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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