The detailed information of tRNA gene sequence


Sequence ID>WENV170684645
Genome IDLFRM01050791
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 98
End posion on genome 174
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ccaccggcgt
tRNA gene sequence 
AGGGGAGTAGCCAAGTCGGTTAAGGCACCGGATTTTGATTCCGGCATGCGAGGGTTCGAA
TCCTTCCTCCCCTGCCA
Downstream region at tRNA end position 
aaccttttcg
Secondary structure (Cloverleaf model)
>WENV170684645	Gln	TTG
                   t      GCCA aaccttttcg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T T C C     A
      T G A        A      | | + | |     G
    C       A C C G       G A G G G     C
    G         | | |                 T T
    G       A G G C
      T T A        A     CATGC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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