The detailed information of tRNA gene sequence


Sequence ID>WENV170684651
Genome IDLFRM01050986
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 943
End posion on genome 870
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnnnnnna
tRNA gene sequence 
GGCCGGGTGGCAGAGTGGTCATGCAGCGGATTGCAAATCCGTCAACGCCGGTTCGATTCC
GACCTCGGCCTCCA
Downstream region at tRNA end position 
tcttgaaagc
Secondary structure (Cloverleaf model)
>WENV170684651	Cys	GCA
                   a      TCCA tcttgaaagc
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C          T T
                    T     C A G C C     A
        G A        G      |   | | |     G
      T     G A C G       G C C G G     C
      G       | | |                 T T
      G     A T G C
        T C        A     CAAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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