The detailed information of tRNA gene sequence


Sequence ID>WENV170684666
Genome IDLFRM01051470
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 228
End posion on genome 154
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
attcggcact
tRNA gene sequence 
GCCCCCTTCGTCTATCGGCTAGGACATCAGGTTCTCATCCTGGAAAGAGGGGTTCGACTC
CCCTAGGGGGTGCCA
Downstream region at tRNA end position 
atcggacgca
Secondary structure (Cloverleaf model)
>WENV170684666	Glu	CTC
                   t      GCCA atcggacgca
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T C
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      T A          A     AAAG
                    T + G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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