The detailed information of tRNA gene sequence


Sequence ID>WENV170684699
Genome IDLFRM01053797
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 85
End posion on genome 159
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
actgcaataa
tRNA gene sequence 
TCCGCGATAGCTCAATGGTGGAGCACTCGGCTGTTAACCGATAGGTTGGAGGTTCGAGTC
CTCTTCGCGGAGCCA
Downstream region at tRNA end position 
acgagagtct
Secondary structure (Cloverleaf model)
>WENV170684699	Asn	GTT
                   a      GCCA acgagagtct
                     T - A
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T G
                    T     T C T C C     A
        A A        A      + | | | |     G
      T     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        T G        A     AGGTT
                    C   T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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