The detailed information of tRNA gene sequence


Sequence ID>WENV170684756
Genome IDLFRM01056743
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1164
End posion on genome 1089
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tcctttaggt
tRNA gene sequence 
GGGCCGCTAGCTCAGCTGGTAGAGCACCGGACTTTTAATCCGGGTGTCGCGGGTTCGAGT
CCCGCGCGGCTCACCA
Downstream region at tRNA end position 
acgaatagcc
Secondary structure (Cloverleaf model)
>WENV170684756	Lys	TTT
                   t      ACCA acgaatagcc
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G          T G
                    T     C G C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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