The detailed information of tRNA gene sequence


Sequence ID>WENV170684828
Genome IDLFRM01060334
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 13191
End posion on genome 13119
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
caattgtagc
tRNA gene sequence 
AGCCCGGTAGTGTAGCGGTCAATCATGCGAGACTCTGGATCTCGCGACAGCAGTTCGAAT
CTGCTCCGGGCTAtac
Downstream region at tRNA end position 
tcgagctttt
Secondary structure (Cloverleaf model)
>WENV170684828	Gln	CTG
                   c      Atac tcgagctttt
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T C G T C     A
      C G A        A      | | | | |     G
    G       T G T G       A G C A G     C
    G         | | +                 T T
    T       T C A T
      C A A        G     CGAC
                    C - G
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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