The detailed information of tRNA gene sequence


Sequence ID>WENV170684829
Genome IDLFRM01060334
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 6992
End posion on genome 6903
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cacattctgt
tRNA gene sequence 
GCTGAGGTAGTCTAGACCGGTAAGGCGCGGGCCTGGAAAGCCCGTGGGGCGTTGAGCCCC
TCGGGAGTTCAAATCTCCCCCTCAGCGCTA
Downstream region at tRNA end position 
ttgtttttgt
Secondary structure (Cloverleaf model)
>WENV170684829	Ser	GGA
                   t      GCTA ttgtttttgt
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      A G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G T A        G     TGGGGCGTTGAGCCCCTC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK