The detailed information of tRNA gene sequence


Sequence ID>WENV170684843
Genome IDLFRM01060814
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 20049
End posion on genome 19977
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
agtcttacat
tRNA gene sequence 
GGGCCGGTAGATCAGGGGAAGATCGCTACCTTGGCATGGTAGAGGCCTCGGGTTCAAATC
CCGACCGGTCCACtt
Downstream region at tRNA end position 
aatattttta
Secondary structure (Cloverleaf model)
>WENV170684843	Ala	GGC
                   t      ACtt aatattttta
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     A G C C C     A
        G A        A      | | | | |     A
      G     C T A G       T C G G G     C
      G     | | | |                 T T
      G     G A T C
        A A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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