The detailed information of tRNA gene sequence


Sequence ID>WENV170684909
Genome IDLFRM01063886
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2566
End posion on genome 2490
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gaaaagacat
tRNA gene sequence 
GGGCTCATAGCTCAGGTGGTAAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAG
TCCATTTGAGCCCACCA
Downstream region at tRNA end position 
ttctagcatc
Secondary structure (Cloverleaf model)
>WENV170684909	Ile	GAT
                   t      ACCA ttctagcatc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T G
                    T     T T A C C     A
      G G A        A      + | | | |     G
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T A A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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