The detailed information of tRNA gene sequence


Sequence ID>WENV170684919
Genome IDLFRM01064137
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 435
End posion on genome 359
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
caccattcct
tRNA gene sequence 
GGCCCCTTGGAGAAGTGGCTTAACTCACCAGCCTTTCACGCTGGCATTCAGGGGTTCGAA
TCCCCTAGGGGTCACCA
Downstream region at tRNA end position 
tttgcggagc
Secondary structure (Cloverleaf model)
>WENV170684919	Glu	TTC
                   t      ACCA tttgcggagc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       A G A G       A G G G G     C
    G         | | |                 T T
    C       A C T C
      T T A        A     CATTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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