The detailed information of tRNA gene sequence


Sequence ID>WENV170684920
Genome IDLFRM01064137
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 353
End posion on genome 277
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caccatttgc
tRNA gene sequence 
GGAGCTGTGGTGTAGTGGTCTAACATGCCTGCCTGTCACGCAGGAGATCGCGGGTTCGAG
TCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
tccttcctgc
Secondary structure (Cloverleaf model)
>WENV170684920	Asp	GTC
                   c      GCCA tccttcctgc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      C T A        G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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