The detailed information of tRNA gene sequence


Sequence ID>WENV170684924
Genome IDLFRM01064216
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 537
End posion on genome 609
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
acaaaccttt
tRNA gene sequence 
GCTGATATAGCTCAGTAGGCAGAGCACATCCTTGGTAAGGATGAGGTCACGCGTTCGATC
CGCGTTATCAGCTttc
Downstream region at tRNA end position 
tatgaggnnn
Secondary structure (Cloverleaf model)
>WENV170684924	Thr	GGT
                   t      Tttc tatgaggnnn
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     T - A
                     A - T          C T
                    T     T G C G C     A
      T G A        A      | | | | |     G
    A       C T C G       A C G C G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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