The detailed information of tRNA gene sequence


Sequence ID>WENV170684953
Genome IDLFRM01065648
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 325
End posion on genome 401
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaggtgaatt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGATAGTTCGAG
TCTATTCAGGCCCACCA
Downstream region at tRNA end position 
atctattttt
Secondary structure (Cloverleaf model)
>WENV170684953	Ile	GAT
                   t      ACCA atctattttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T T A T C     A
      T G A        A      + | | | |     G
    T       C T C G       G A T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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