The detailed information of tRNA gene sequence


Sequence ID>WENV170684960
Genome IDLFRM01065834
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1335
End posion on genome 1410
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttaatgattc
tRNA gene sequence 
GCTCATGTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAACT
CCGCTCATGAGCTCCA
Downstream region at tRNA end position 
gaacgacaaa
Secondary structure (Cloverleaf model)
>WENV170684960	Thr	GGT
                   c      TCCA gaacgacaaa
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     T - A
                     G - C          T C
                    T     T C G C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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