The detailed information of tRNA gene sequence


Sequence ID>WENV170684967
Genome IDLFRM01066078
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 74262
End posion on genome 74337
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tattttgttt
tRNA gene sequence 
GCCCAGATAGCTCAGTCGGTAGAGCAGTGGACTGAAAATCCTCGTGTCGGTGGTTCGATT
CCGCCTCTGGGCACCA
Downstream region at tRNA end position 
aatttaatat
Secondary structure (Cloverleaf model)
>WENV170684967	Phe	GAA
                   t      ACCA aatttaatat
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    T   T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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