The detailed information of tRNA gene sequence


Sequence ID>WENV170684986
Genome IDLFRM01067196
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2236
End posion on genome 2312
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttttcttt
tRNA gene sequence 
GGCGATGTAGCTCAGATGGTCAGAGCATGCGGCTCATATCCGCAGTGTCCGGGGTTCAAT
TCCCTGCATCGCCACCA
Downstream region at tRNA end position 
aatcgatatc
Secondary structure (Cloverleaf model)
>WENV170684986	Met	CAT
                   t      ACCA aatcgatatc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     G T C C C     A
      A G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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