The detailed information of tRNA gene sequence


Sequence ID>WENV170685026
Genome IDLFRM01069926
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 23263
End posion on genome 23179
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gacgaacaat
tRNA gene sequence 
GGGGGAGTTCCCGAGCGGCTAAAGGGGGCAGACTGTAAATCTGTTGTCAACGACTTCGGT
GGTTCGAATCCACTCTCCCCCACCA
Downstream region at tRNA end position 
ttgtcagatg
Secondary structure (Cloverleaf model)
>WENV170685026	Tyr	GTA
                   t      ACCA ttgtcagatg
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C A C C     A
      C G A        T      + | | | |     G
    G       G C C C       G G T G G     C
    G         | | |                 T T
    C       A G G G
      T A A        G     TGTCAACGACTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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