The detailed information of tRNA gene sequence


Sequence ID>WENV170685076
Genome IDLFRM01071884
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 89
End posion on genome 14
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
tttttaatgg
tRNA gene sequence 
TGGGATGTAGCCAAGCTGGTAAGGCACCAGACTTTGACTCTGGCATTCGTAGGTTCGAGT
CCTGCCATCCCAGCCA
Downstream region at tRNA end position 
aatatgaccc
Secondary structure (Cloverleaf model)
>WENV170685076	Gln	TTG
                   g      GCCA aatatgaccc
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C G T C C     A
      C G A        A      | + | | |     G
    T       A C C G       G T A G G     C
    G         | | |                 T T
    G       A G G C
      T A          A     CATTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       C
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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