The detailed information of tRNA gene sequence


Sequence ID>WENV170685105
Genome IDLFRM01072973
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2640
End posion on genome 2558
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aggccaccaT
tRNA gene sequence 
GGAGGGGTAGCGAAGTGGCTAAACGCGGCGGACTGTAAATCCGCTCCTTCGGGTTCGGCA
GTTCGAATCTGCCCCCCTCCATtc
Downstream region at tRNA end position 
tttttttgtt
Secondary structure (Cloverleaf model)
>WENV170685105	Tyr	GTA
                   T      ATtc tttttttgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C G T C     A
      T G A        A      | | | | |     G
    G       A G C G       G G C A G     C
    G         | | |                 T T
    C       A C G C
      T A A        G     TCCTTCGGGTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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