The detailed information of tRNA gene sequence


Sequence ID>WENV170685111
Genome IDLFRM01073186
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 209
End posion on genome 285
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gaaccgatcc
tRNA gene sequence 
GGGCTCATAGCTCAGCTGGTTAGAGCGTACGCCTGATAAGCGTAAGGTCGGTGGTTCGAG
TCCACTTGAGCCCACCA
Downstream region at tRNA end position 
gtatcagaag
Secondary structure (Cloverleaf model)
>WENV170685111	Ile	GAT
                   c      ACCA gtatcagaag
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T G
                    T     T C A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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