The detailed information of tRNA gene sequence


Sequence ID>WENV170685112
Genome IDLFRM01073316
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1758
End posion on genome 1682
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aatataaaat
tRNA gene sequence 
TCTTCAGTAGCTCAGTCGGTTAGAGCATCTGACTGTTAATCAGAGGGTCGCTGGTTCAAG
TCCAGCCTGAAGAGCGA
Downstream region at tRNA end position 
aaagagagtg
Secondary structure (Cloverleaf model)
>WENV170685112	Asn	GTT
                   t      GCGA aaagagagtg
                     T - A
                     C - G
                     T - A
                     T - A
                     C - G
                     A - T
                     G - C          T G
                    T     C G A C C     A
      T G A        A      | | | | |     A
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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