The detailed information of tRNA gene sequence


Sequence ID>WENV170685114
Genome IDLFRM01073348
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 25439
End posion on genome 25364
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
agaaagacat
tRNA gene sequence 
TCCTCAATAGCTCAGTCGGTAGAGCATGCGGCTGTTAACCGCAGGGTCGTTGGTTCGAGT
CCAACTTGAGGAGCCA
Downstream region at tRNA end position 
tgagggcctt
Secondary structure (Cloverleaf model)
>WENV170685114	Asn	GTT
                   t      GCCA tgagggcctt
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     A - T          T G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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