The detailed information of tRNA gene sequence


Sequence ID>WENV170685115
Genome IDLFRM01073348
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 25360
End posion on genome 25284
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggagccatga
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGTTAGAGCTCCCGGCTCATAACCGGTAGGTCCGGGGTTCGAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
ttaaaaggat
Secondary structure (Cloverleaf model)
>WENV170685115	Met	CAT
                   a      ACCA ttaaaaggat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTC
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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