The detailed information of tRNA gene sequence


Sequence ID>WENV170685122
Genome IDLFRM01073647
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4726
End posion on genome 4802
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ttttgagatg
tRNA gene sequence 
GTGAGTGTAGCTCAGTTGGTTAGAGCATCAGGTTGTGGCTCTGAGGGCCGTGGGTTCGAT
TCCCATCACTCACCCCA
Downstream region at tRNA end position 
ttagagtttt
Secondary structure (Cloverleaf model)
>WENV170685122	His	GTG
                   g      CCCA ttagagtttt
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T T
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGCC
                    T - A
                    C - G
                    A - T
                    G - C
                    G + T
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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