The detailed information of tRNA gene sequence


Sequence ID>WENV170685143
Genome IDLFRM01074920
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4441
End posion on genome 4517
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cgccccatat
tRNA gene sequence 
AGGCACATAGCTCAGCTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAA
TCCAATTGTGCCTACCA
Downstream region at tRNA end position 
aattgatgga
Secondary structure (Cloverleaf model)
>WENV170685143	Val	GAC
                   t      ACCA aattgatgga
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     A - T          T A
                    T     T A A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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