The detailed information of tRNA gene sequence


Sequence ID>WENV170685195
Genome IDLFRM01077746
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 97
End posion on genome 21
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaggtgaatt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGATAGTTCGAG
TCTATTCAGGCCCACCA
Downstream region at tRNA end position 
atctattttt
Secondary structure (Cloverleaf model)
>WENV170685195	Ile	GAT
                   t      ACCA atctattttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T T A T C     A
      T G A        A      + | | | |     G
    T       C T C G       G A T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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