The detailed information of tRNA gene sequence


Sequence ID>WENV170685234
Genome IDLFRM01079843
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 262
End posion on genome 174
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccaccaagtt
tRNA gene sequence 
GGAGGAGTACCCAAGCGGCTGAAGGGACTGGTCTTGAAAACCAGCAGACGTGAAAGCGTG
CGGGAGTTCGAATCTCCCCTCCTCCGCCA
Downstream region at tRNA end position 
ttatttaaat
Secondary structure (Cloverleaf model)
>WENV170685234	Ser	TGA
                   t      GCCA ttatttaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C C C T C     A
      C G A        A      | | | | |     G
    G       A C C C       G G G A G     C
    G         | | |                 T T
    C       A G G G
      T G A        A     CAGACGTGAAAGCGTGC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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