The detailed information of tRNA gene sequence


Sequence ID>WENV170685239
Genome IDLFRM01080035
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1080
End posion on genome 1005
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tcttatttga
tRNA gene sequence 
TCCCCGATAGCTCAGACGGTAGAGCGACGGACTGTTAATCCGCAGGTCACTGGTTCGATC
CCAGTTCGGGGAGCCA
Downstream region at tRNA end position 
aatttaaaat
Secondary structure (Cloverleaf model)
>WENV170685239	Asn	GTT
                   a      GCCA aatttaaaat
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          C T
                    T     T G A C C     A
      A G A        A      | | | | |     G
    C       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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