The detailed information of tRNA gene sequence


Sequence ID>WENV170685287
Genome IDLFRM01083290
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 22154
End posion on genome 22079
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
agggttatta
tRNA gene sequence 
GGGCGCTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGGGGGTCATAGGTTCGAGC
CCTATAGTGCCCACCA
Downstream region at tRNA end position 
tatgctggtg
Secondary structure (Cloverleaf model)
>WENV170685287	Val	TAC
                   a      ACCA tatgctggtg
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     T - A          C G
                    T     T A T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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